Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40594.1Phosphate transporter. (332 aa)    
Predicted Functional Partners:
EFL40593.1
Pit accessory protein.
 
  
 0.994
EFL40592.1
Conserved hypothetical protein.
       0.742
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.683
EFL41895.1
Glutamate synthase large subunit.
  
  
 0.632
EFL37252.1
Conserved hypothetical protein.
   
    0.586
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
    0.568
EFL37713.1
Integral membrane protein.
 
 
   0.406
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
   0.405
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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