STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40603.1ABC transport system transmembrane protein; Unextendable partial coding region. (546 aa)    
Predicted Functional Partners:
EFL40602.1
Integral membrane protein.
 
     0.885
EFL41178.1
SEC-C domain-containing protein.
  
     0.770
EFL39783.1
Conserved hypothetical protein.
  
     0.769
EFL41979.1
Conserved hypothetical protein.
  
     0.757
EFL38670.1
PE-PGRS family protein.
  
     0.750
EFL40923.1
Membrane protein.
  
     0.745
EFL38200.1
Conserved hypothetical protein.
  
     0.731
EFL40958.1
Integral membrane protein.
  
     0.725
EFL39627.1
Serine/threonine protein kinase.
  
     0.721
EFL40143.1
Conserved hypothetical protein.
  
     0.721
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.