STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40611.1LacI-family regulatory protein. (342 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
    
 
 0.897
EFL40610.1
Protease.
     
 0.841
EFL40612.1
Transcriptional regulatory protein GlnR.
       0.819
EFL38677.1
HPr family phosphocarrier.
 
 
 
 0.796
EFL43466.1
LacI family transcriptional regulator.
  
     0.772
EFL40608.1
Signal transduction histidine-protein kinase/phosphatase MprB.
       0.730
EFL40609.1
DNA-binding response regulator.
       0.730
EFL40613.1
Hydrolase.
       0.723
EFL40615.1
Integral membrane protein.
  
    0.701
EFL40614.1
Molybdopterin converting factor.
       0.700
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.