STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40613.1Hydrolase. (291 aa)    
Predicted Functional Partners:
EFL40614.1
Molybdopterin converting factor.
       0.818
EFL40615.1
Integral membrane protein.
       0.818
EFL40612.1
Transcriptional regulatory protein GlnR.
       0.736
EFL40611.1
LacI-family regulatory protein.
       0.707
EFL40610.1
Protease.
       0.664
EFL40608.1
Signal transduction histidine-protein kinase/phosphatase MprB.
  
    0.648
EFL40609.1
DNA-binding response regulator.
       0.644
EFL40616.1
Secreted protein.
 
     0.633
EFL42467.1
IMP dehydrogenase.
     
  0.611
EFL39616.1
GMP synthase.
     
  0.597
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.