STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40616.1Secreted protein. (246 aa)    
Predicted Functional Partners:
EFL40619.1
Integral membrane protein.
       0.708
EFL40613.1
Hydrolase.
 
     0.650
EFL38653.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.624
EFL40618.1
Conserved hypothetical protein.
 
     0.619
EFL42136.1
Conserved hypothetical protein.
  
     0.612
EFL41864.1
Membrane protein.
  
     0.601
EFL40614.1
Molybdopterin converting factor.
       0.572
EFL40615.1
Integral membrane protein.
       0.572
EFL38698.1
Conserved hypothetical protein.
  
     0.554
EFL40817.1
Integral membrane protein.
  
     0.527
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.