STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40622.1Secreted protein. (266 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.885
EFL40621.1
Membrane protein.
       0.878
EFL40623.1
Membrane protein.
       0.878
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.867
EFL40620.1
Conserved hypothetical protein.
       0.789
EFL42695.1
Hypothetical protein.
  
 0.787
htpG
Heat shock protein HtpG; Molecular chaperone. Has ATPase activity.
   
 0.760
EFL40624.1
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
       0.729
EFL40625.1
Iron uptake regulatory protein; Belongs to the Fur family.
       0.719
EFL40626.1
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
       0.716
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.