Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL40625.1Iron uptake regulatory protein; Belongs to the Fur family. (145 aa)    
Predicted Functional Partners:
EFL41895.1
Glutamate synthase large subunit.
    
 0.888
EFL40626.1
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
       0.871
EFL40624.1
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
       0.858
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.731
EFL40621.1
Membrane protein.
       0.719
EFL40622.1
Secreted protein.
       0.719
EFL40623.1
Membrane protein.
       0.719
EFL38634.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
   
 0.683
EFL40620.1
Conserved hypothetical protein.
       0.681
EFL39385.1
Alkyl hydroperoxide reductase C.
  
  
 0.653
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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