STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40626.1Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family. (321 aa)    
Predicted Functional Partners:
EFL40624.1
Conserved hypothetical protein; May play a role in the intracellular transport of hydrophobic ligands.
 
    0.930
EFL41761.1
HesB/YadR/YfhF family protein; Belongs to the HesB/IscA family.
 
 
 0.902
EFL40625.1
Iron uptake regulatory protein; Belongs to the Fur family.
       0.864
EFL40621.1
Membrane protein.
       0.731
EFL40622.1
Secreted protein.
       0.731
EFL40623.1
Membrane protein.
       0.731
EFL40620.1
Conserved hypothetical protein.
       0.695
EFL41531.1
Conserved hypothetical protein.
  
     0.690
EFL38387.1
Conserved hypothetical protein.
  
     0.623
EFL40083.1
Ser/Thr protein phosphatase.
  
     0.599
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.