STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40633.1TetR family transcriptional regulator. (205 aa)    
Predicted Functional Partners:
EFL40634.1
ATP-dependent DNA helicase.
 
     0.896
EFL40632.1
Hydrolase.
 
     0.713
EFL37795.1
TetR family transcriptional regulator; Unextendable partial coding region.
  
     0.710
EFL40858.1
TetR-family transcriptional regulator.
  
     0.668
EFL40631.1
GntR-family transcriptional regulator.
       0.589
EFL37803.1
TetR family transcriptional Regulator.
  
     0.446
EFL39780.1
Regulatory protein AfsR.
  
    0.411
EFL37343.1
AraC family transcriptional regulator.
  
  
 0.407
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.