STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40635.1GntR family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
EFL38678.1
Transcriptional regulator.
  
  
 0.777
EFL41744.1
Regulatory protein GntR, HTH.
  
  
 0.771
EFL38695.1
Sporulation transcription factor, WhiH.
  
     0.739
EFL40181.1
GntR-family transcriptional regulator.
  
  
 0.738
EFL37406.1
GntR family transcriptional regulator.
  
  
 0.735
EFL40636.1
Conserved hypothetical protein; Unextendable partial coding region.
 
     0.661
EFL43403.1
GntR family transcriptional regulator.
  
    0.656
EFL40637.1
Secreted solute-binding protein.
 
    0.640
EFL42508.1
GntR family transcriptional regulator.
  
  
 0.621
EFL40470.1
korSA, regulatory protein.
  
    0.614
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.