STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40636.1Conserved hypothetical protein; Unextendable partial coding region. (422 aa)    
Predicted Functional Partners:
EFL42007.1
NifU family SUF system FeS assembly protein.
  
 0.985
EFL40637.1
Secreted solute-binding protein.
 
     0.913
EFL42005.1
FeS assembly ATPase SufC.
  
  
 0.828
EFL37479.1
Secreted protein.
  
 
   0.811
EFL41693.1
Membrane protein.
    
   0.783
EFL41793.1
Endonuclease/exonuclease/phosphatase.
    
   0.783
EFL42836.1
Membrane protein.
    
   0.783
EFL43313.1
Endonuclease/exonuclease/phosphatase.
    
   0.783
EFL40638.1
Binding-protein-dependent transport system inner membrane component.
 
     0.781
EFL40639.1
Sugar ABC transporter, permease.
 
     0.771
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.