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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40650.1Conserved hypothetical protein. (272 aa)    
Predicted Functional Partners:
EFL41979.1
Conserved hypothetical protein.
  
     0.757
EFL41178.1
SEC-C domain-containing protein.
  
     0.753
EFL41086.1
Membrane protein.
  
     0.745
EFL39783.1
Conserved hypothetical protein.
  
     0.743
EFL40958.1
Integral membrane protein.
  
     0.740
EFL40139.1
Conserved hypothetical protein.
  
     0.713
EFL41088.1
Integral membrane protein.
  
  
  0.713
EFL40603.1
ABC transport system transmembrane protein; Unextendable partial coding region.
  
     0.706
EFL39674.1
Integral membrane protein.
  
     0.698
EFL39616.1
GMP synthase.
    
  0.693
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.