STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40653.1Fusidic acid esterase. (473 aa)    
Predicted Functional Partners:
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL40710.1
Serine metalloprotease MprA.
   
 0.771
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL40650.1
Conserved hypothetical protein.
 
  
 0.697
EFL40737.1
Conserved hypothetical protein.
  
     0.635
EFL40651.1
Conserved hypothetical protein.
       0.603
EFL39459.1
Conserved hypothetical protein.
    
   0.560
EFL39464.1
dTMP kinase.
    
   0.560
EFL40196.1
Membrane protein.
  
     0.464
EFL40652.1
AraC family transcriptional regulator.
       0.455
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.