Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40654.1Conserved hypothetical protein. (301 aa)    
Predicted Functional Partners:
EFL40650.1
Conserved hypothetical protein.
  
     0.517
EFL40655.1
PE-PGRS family protein.
       0.502
EFL42926.1
Conserved hypothetical protein.
  
     0.497
EFL41925.1
Methyltransferase domain-containing protein.
  
     0.473
EFL41389.1
Fusidic acid esterase.
  
     0.471
EFL40737.1
Conserved hypothetical protein.
  
     0.458
EFL40656.1
Hypothetical protein.
       0.456
EFL41395.1
Conserved hypothetical protein.
  
     0.444
EFL41979.1
Conserved hypothetical protein.
  
     0.439
EFL42817.1
Xre family toxin-antitoxin system, antitoxin component.
  
     0.439
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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