STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40673.1Integral membrane protein. (442 aa)    
Predicted Functional Partners:
EFL41472.1
Nitrite reductase [NAD(P)H], large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.931
EFL41642.1
Ferredoxin reductase.
  
 0.931
EFL43178.1
Ferredoxin reductase.
  
 0.931
EFL41802.1
Conserved hypothetical protein.
  
 
 0.864
EFL41895.1
Glutamate synthase large subunit.
  
 
 0.862
EFL41482.1
Ferredoxin reductase.
  
 0.850
EFL41811.1
Ferredoxin reductase.
  
 0.850
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.795
EFL40672.1
RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.760
EFL39938.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
  
 0.744
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.