STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40680.1Conserved hypothetical protein. (386 aa)    
Predicted Functional Partners:
EFL40681.1
Pentapeptide repeats-containing protein; Pentapeptide repeats (8 copies) (3 repeats).
       0.788
EFL37827.1
Squalene synthase HpnD.
  
 
 0.693
EFL37828.1
Squalene synthase HpnC.
  
 
 0.693
EFL41091.1
Conserved hypothetical protein.
  
     0.573
EFL41392.1
Integral membrane protein.
  
     0.562
EFL41395.1
Conserved hypothetical protein.
  
     0.562
ispD-2
Pyrophosphorylase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.555
EFL42076.1
Magnesium chelatase.
  
 
 0.526
EFL40291.1
Mucin-2.
  
     0.524
EFL42622.1
Conserved hypothetical protein.
  
     0.477
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.