Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL40705.1Transcriptional regulator. (314 aa)    
Predicted Functional Partners:
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.943
EFL37481.1
PTS system, IIBC component.
 
 
 0.898
EFL40706.1
Conserved hypothetical protein.
       0.782
EFL40707.1
Conserved hypothetical protein.
       0.782
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.743
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.743
EFL40702.1
Conserved hypothetical protein.
     
 0.743
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 
 0.609
EFL42522.1
PTS system, glucose-specific IIABC component.
 
 
 0.602
EFL41031.1
Phosphomannose isomerase type I.
  
 
  0.586
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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