STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40767.1Conserved hypothetical protein. (264 aa)    
Predicted Functional Partners:
EFL40768.1
Conserved hypothetical protein.
 
     0.945
EFL40769.1
propionyl-CoA carboxylase, beta subunit.
 
     0.890
EFL40774.1
TetR family transcriptional regulator.
 
     0.791
EFL40771.1
acyl-CoA dehydrogenase.
 
     0.753
EFL40764.1
Integral membrane protein.
       0.572
EFL40772.1
4-coumarate:CoA ligase.
       0.572
EFL40773.1
enoyl-CoA hydratase/isomerase.
       0.572
EFL40765.1
Helix-turn-helix domain-containing protein.
       0.563
EFL40766.1
RelE family toxin-antitoxin system, toxin component.
       0.563
EFL37492.1
Cytochrome P450 monooxygenase.
  
  
  0.515
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.