STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40774.1TetR family transcriptional regulator. (204 aa)    
Predicted Functional Partners:
EFL40771.1
acyl-CoA dehydrogenase.
 
     0.916
EFL40772.1
4-coumarate:CoA ligase.
       0.878
EFL40773.1
enoyl-CoA hydratase/isomerase.
       0.878
EFL40768.1
Conserved hypothetical protein.
 
     0.822
EFL40767.1
Conserved hypothetical protein.
 
     0.781
EFL40769.1
propionyl-CoA carboxylase, beta subunit.
 
     0.622
EFL40764.1
Integral membrane protein.
       0.552
EFL40770.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
   
   0.492
EFL40886.1
Regulatory protein, MerR.
  
     0.469
EFL43232.1
Conserved hypothetical protein.
  
     0.437
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.