STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40781.1Iron-dependent repressor IdeR. (230 aa)    
Predicted Functional Partners:
metN
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.760
EFL40780.1
Conserved hypothetical protein; Belongs to the UPF0309 family.
       0.746
EFL41462.1
ABC zinc/manganese transport system permease.
  
 
 0.720
EFL43306.1
Cation ABC transporter, ATP-binding protein.
  
 
 0.720
EFL43307.1
ABC-type Mn2+ transport system, permease component.
  
 
 0.720
EFL41738.1
Conserved hypothetical protein.
   
    0.643
EFL41426.1
Conserved hypothetical protein.
  
 
 0.628
EFL41464.1
ABC-transporter metal-binding lipoprotein.
  
 
 0.628
EFL43309.1
Solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.628
EFL38635.1
Ferric citrate transport system ATP-binding protein.
  
 
 0.618
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.