STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40781.1Iron-dependent repressor IdeR. (230 aa)    
Predicted Functional Partners:
metN
D-methionine ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.907
EFL40780.1
Conserved hypothetical protein; Belongs to the UPF0309 family.
       0.756
EFL38634.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.715
EFL41461.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.715
EFL37549.1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.682
EFL41462.1
ABC zinc/manganese transport system permease.
  
 
 0.677
EFL43307.1
ABC-type Mn2+ transport system, permease component.
  
 
 0.677
EFL41679.1
Heme oxygenase.
      
 0.631
EFL41426.1
Conserved hypothetical protein.
  
 
 0.624
EFL41464.1
ABC-transporter metal-binding lipoprotein.
  
 
 0.624
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.