Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
EFL40784.1N- superfamily bifunctional DNA primase/polymerase. (217 aa)    
Predicted Functional Partners:
EFL40783.1
Integral membrane transporter.
       0.878
EFL40785.1
Sporulation associated protein.
 
     0.779
EFL42502.1
Membrane protein.
  
     0.748
EFL41291.1
Conserved hypothetical protein.
  
     0.744
EFL40584.1
Membrane protein.
  
     0.730
EFL40333.1
Conserved hypothetical protein.
  
     0.726
EFL38861.1
Conserved hypothetical protein.
  
     0.714
EFL39949.1
Conserved hypothetical protein.
  
     0.712
EFL39969.1
Alanine-rich protein.
  
     0.707
EFL40327.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.693
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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