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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40784.1N- superfamily bifunctional DNA primase/polymerase. (217 aa)    
Predicted Functional Partners:
EFL40783.1
Integral membrane transporter.
       0.870
EFL40785.1
Sporulation associated protein.
 
     0.781
EFL42502.1
Membrane protein.
  
     0.748
EFL41291.1
Conserved hypothetical protein.
  
     0.744
EFL40584.1
Membrane protein.
  
     0.730
EFL40333.1
Conserved hypothetical protein.
  
     0.726
EFL38861.1
Conserved hypothetical protein.
  
     0.714
EFL39949.1
Conserved hypothetical protein.
  
     0.712
EFL39969.1
Alanine-rich protein.
  
     0.707
EFL40327.1
Membrane protein; Overlaps another CDS with the same product name.
  
     0.693
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.