STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40793.1Calcium binding protein. (170 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
 0.976
EFL38670.1
PE-PGRS family protein.
  
 
 0.943
EFL41696.1
Membrane protein.
  
 
 0.943
EFL38200.1
Conserved hypothetical protein.
  
 
 0.939
EFL42265.1
FK-506 binding protein, peptidyl-prolyl cis-trans isomerase.
   
 
 0.937
EFL42266.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
   
 
 0.937
EFL40812.1
Conserved hypothetical protein.
    
 0.922
EFL41929.1
Transport integral membrane protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.892
EFL42246.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.892
EFL37298.1
Hypothetical protein.
    
 0.889
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.