STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40800.1Pyridoxamine 5-phosphate oxidase. (141 aa)    
Predicted Functional Partners:
EFL40799.1
Pyridoxamine 5'-phosphate oxidase.
     
 0.837
EFL41921.1
Conserved hypothetical protein.
   
    0.583
EFL40801.1
TetR-family transcriptional regulator.
       0.514
EFL41201.1
Decarboxylase; Overlaps another CDS with the same product name.
  
     0.502
EFL39973.1
Conserved hypothetical protein.
  
     0.477
EFL43019.1
Integral membrane protein.
  
     0.451
EFL42726.1
Glyoxalase.
  
     0.432
EFL41197.1
Conserved hypothetical protein.
  
     0.429
EFL40809.1
F420-dependent oxidoreductase.
  
     0.426
EFL41279.1
Recombinase.
  
     0.415
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.