STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40801.1TetR-family transcriptional regulator. (211 aa)    
Predicted Functional Partners:
EFL40802.1
Glyoxalase.
       0.772
EFL40584.1
Membrane protein.
  
     0.764
EFL42502.1
Membrane protein.
  
     0.764
EFL41403.1
Membrane protein.
  
     0.752
EFL40333.1
Conserved hypothetical protein.
  
     0.748
EFL40585.1
Integral membrane protein.
  
     0.740
EFL40182.1
Conserved hypothetical protein.
  
     0.715
EFL40210.1
Conserved hypothetical protein.
  
     0.711
EFL40583.1
ATP/GTP-binding protein.
  
     0.711
EFL40799.1
Pyridoxamine 5'-phosphate oxidase.
       0.710
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.