STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40818.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (471 aa)    
Predicted Functional Partners:
EFL39568.1
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.949
EFL40010.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.929
EFL40305.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.924
EFL37766.1
D-alanyl-D-alanine carboxypeptidase.
  
  
0.861
EFL40817.1
Integral membrane protein.
 
  
 0.850
EFL39378.1
Bifunctional penicillin-binding protein 1a/1b pona1.
   
 
 0.744
EFL40399.1
Penicillin-binding protein.
   
 
 0.744
EFL41157.1
Penicillin-binding protein 1.
   
 
 0.744
EFL40822.1
Toxin-antitoxin system, toxin component.
     
 0.696
EFL37708.1
Beta-lactamase.
     
 0.661
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.