Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL40821.1Xre family toxin-antitoxin system, antitoxin component. (285 aa)    
Predicted Functional Partners:
EFL43107.1
Toxin-antitoxin system, toxin component.
 
   
 0.778
EFL40021.1
Toxin-antitoxin system, toxin component.
 
   
 0.775
EFL41942.1
Toxin-antitoxin system, toxin component.
 
     0.775
EFL40820.1
Conserved hypothetical protein.
 
   
 0.773
EFL39033.1
Conserved hypothetical protein.
  
     0.768
EFL41943.1
Conserved hypothetical protein.
  
     0.767
EFL39715.1
Conserved hypothetical protein.
  
     0.765
EFL37499.1
Conserved hypothetical protein.
  
     0.762
EFL37918.1
Conserved hypothetical protein.
  
     0.762
EFL39922.1
Conserved hypothetical protein.
  
     0.762
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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