STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40825.1Transcriptional regulator. (327 aa)    
Predicted Functional Partners:
EFL40826.1
Integral membrane protein.
 
     0.948
EFL40824.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
       0.878
EFL40823.1
MerR-family transcriptional regulator.
     
 0.789
EFL40477.1
GCN5 N-acetyltransferase.
  
     0.501
EFL39840.1
Membrane protein.
  
     0.462
EFL38994.1
GNAT family acetyltransferase.
  
     0.443
EFL43039.1
Conserved hypothetical protein.
  
     0.431
EFL40134.1
Secreted protein.
  
     0.422
EFL37883.1
Sugar-binding lipoprotein.
  
     0.415
EFL41409.1
Integral membrane protein.
  
     0.414
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.