STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL40837.1Glutamate decarboxylase; Belongs to the group II decarboxylase family. (464 aa)    
Predicted Functional Partners:
EFL38072.1
Aminotransferase class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.923
EFL38809.1
4-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.923
EFL41895.1
Glutamate synthase large subunit.
    
 0.893
EFL41730.1
Glutamine synthetase, type I.
    
 0.892
EFL38079.1
Gamma-glutamyltransferase.
     
 0.891
EFL41698.1
Glutamine synthetase, type I.
    
 0.891
EFL41055.1
Glutamate dehydrogenase.
     
 0.879
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 
 0.877
EFL37540.1
Condensation domain-containing protein.
  
 
 0.877
EFL43484.1
Polyketide synthase.
  
 
 0.877
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.