Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vapC-5PIN family toxin-antitoxin system, toxin component; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (155 aa)    
Predicted Functional Partners:
EFL40842.1
PHD family toxin-antitoxin system, antitoxin component.
 
 
 
 0.995
EFL40232.1
Hypothetical protein.
  
   0.657
EFL40510.1
Conserved hypothetical protein.
  
   0.657
EFL43325.1
Nipsnap superfamily protein.
  
     0.617
EFL42628.1
Axe family addiction module antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.579
EFL40209.1
Toxin-antitoxin system, antitoxin component.
 
   
 0.436
EFL42907.1
Conserved hypothetical protein.
  
     0.408
EFL40844.1
Membrane protein.
       0.400
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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