STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40844.1Membrane protein. (243 aa)    
Predicted Functional Partners:
EFL39286.1
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.774
EFL38549.1
Glucosyltransferase.
  
 
 0.705
EFL41298.1
Transferase.
  
 
 0.705
EFL38231.1
HAD-superfamily hydrolase subfamily IIIA; Truncated CDS.
  
 
 0.700
EFL38552.1
Membrane protein; Overlaps another CDS with the same product name.
  
 
 0.606
EFL38553.1
Membrane protein; Overlaps another CDS with the same product name.
  
 
 0.606
EFL38565.1
Membrane protein.
  
  
 0.592
EFL39800.1
Conserved hypothetical protein.
  
  
 0.592
EFL39109.1
DEAD/DEAH box helicase.
  
     0.587
EFL37831.1
Glycosyltransferase.
 
 
 0.566
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.