STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40861.1DeoR family transcriptional regulator. (253 aa)    
Predicted Functional Partners:
EFL40862.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.971
EFL40863.1
PTS system, fructose-specific family, IIABC component.
 
  
 0.888
EFL42805.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.828
EFL40689.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.826
EFL38675.1
GNAT family acetyltransferase.
    
   0.619
EFL38676.1
GNAT family acetyltransferase.
    
   0.619
EFL40860.1
Actinorhodin transporter; Belongs to the major facilitator superfamily.
       0.527
EFL42521.1
Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
  
 0.435
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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