STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40947.1SMI1/KNR4 family protein. (339 aa)    
Predicted Functional Partners:
EFL40948.1
Conserved hypothetical protein.
       0.866
EFL40946.1
Conserved hypothetical protein.
       0.709
EFL41073.1
FHA domain-containing protein.
  
 
 0.706
EFL40945.1
Conserved hypothetical protein.
       0.692
EFL38757.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.681
EFL38985.1
FtsK/SpoIIIE family protein.
   
 
 0.681
EFL39751.1
Conserved hypothetical protein.
   
 
 0.681
EFL39854.1
Cell division protein.
   
 
 0.681
EFL40126.1
Transfer protein traSA.
   
 
 0.681
EFL40472.1
Transfer protein traSA.
   
 
 0.681
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.