STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL40983.1Transcriptional regulator. (280 aa)    
Predicted Functional Partners:
EFL37481.1
PTS system, IIBC component.
  
 
 0.815
EFL40984.1
Integral membrane protein.
       0.789
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.713
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
  0.713
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
  
 
 0.623
EFL41031.1
Phosphomannose isomerase type I.
  
 
 0.620
EFL38335.1
Proline/glycine betaine ABC transporter, permease.
       0.572
EFL41607.1
KHG/KDPG aldolase.
    
 0.527
EFL41995.1
Conserved hypothetical protein.
  
     0.509
EFL37969.1
ROK family transcriptional regulator.
  
 
 0.499
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.