Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL37868.1 | EFL38082.1 | SSRG_00672 | SSRG_00886 | DNA ligase. | Exodeoxyribonuclease III. | 0.795 |
EFL37868.1 | EFL40884.1 | SSRG_00672 | SSRG_03688 | DNA ligase. | Exodeoxyribonuclease III. | 0.795 |
EFL37868.1 | EFL41018.1 | SSRG_00672 | SSRG_03822 | DNA ligase. | Conserved hypothetical protein. | 0.616 |
EFL38051.1 | EFL38082.1 | SSRG_00855 | SSRG_00886 | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease III. | 0.936 |
EFL38051.1 | EFL40884.1 | SSRG_00855 | SSRG_03688 | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | Exodeoxyribonuclease III. | 0.932 |
EFL38051.1 | EFL41018.1 | SSRG_00855 | SSRG_03822 | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | Conserved hypothetical protein. | 0.534 |
EFL38051.1 | nfo | SSRG_00855 | SSRG_04609 | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.556 |
EFL38082.1 | EFL37868.1 | SSRG_00886 | SSRG_00672 | Exodeoxyribonuclease III. | DNA ligase. | 0.795 |
EFL38082.1 | EFL38051.1 | SSRG_00886 | SSRG_00855 | Exodeoxyribonuclease III. | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | 0.936 |
EFL38082.1 | EFL40884.1 | SSRG_00886 | SSRG_03688 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.921 |
EFL38082.1 | EFL41018.1 | SSRG_00886 | SSRG_03822 | Exodeoxyribonuclease III. | Conserved hypothetical protein. | 0.894 |
EFL38082.1 | nfo | SSRG_00886 | SSRG_04609 | Exodeoxyribonuclease III. | Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.966 |
EFL40884.1 | EFL37868.1 | SSRG_03688 | SSRG_00672 | Exodeoxyribonuclease III. | DNA ligase. | 0.795 |
EFL40884.1 | EFL38051.1 | SSRG_03688 | SSRG_00855 | Exodeoxyribonuclease III. | Transcriptional regulator, Ada family/DNA-3-methyladenine glycosylase II. | 0.932 |
EFL40884.1 | EFL38082.1 | SSRG_03688 | SSRG_00886 | Exodeoxyribonuclease III. | Exodeoxyribonuclease III. | 0.921 |
EFL40884.1 | EFL41018.1 | SSRG_03688 | SSRG_03822 | Exodeoxyribonuclease III. | Conserved hypothetical protein. | 0.894 |
EFL40884.1 | nfo | SSRG_03688 | SSRG_04609 | Exodeoxyribonuclease III. | Apurinic endonuclease (APN1); Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. | 0.963 |
EFL41015.1 | EFL41016.1 | SSRG_03819 | SSRG_03820 | Transcriptional regulator. | Conserved hypothetical protein. | 0.577 |
EFL41015.1 | EFL41017.1 | SSRG_03819 | SSRG_03821 | Transcriptional regulator. | Mannose-1-phosphate guanyltransferase. | 0.473 |
EFL41015.1 | EFL41018.1 | SSRG_03819 | SSRG_03822 | Transcriptional regulator. | Conserved hypothetical protein. | 0.568 |
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