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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41190.1Membrane protein. (446 aa)    
Predicted Functional Partners:
EFL39469.1
Regulatory protein.
  
     0.756
EFL40473.1
Conserved hypothetical protein.
  
     0.680
EFL40786.1
Conserved hypothetical protein.
  
     0.676
EFL39621.1
Conserved hypothetical protein.
  
     0.672
EFL40125.1
Conserved hypothetical protein.
  
     0.656
EFL39929.1
Membrane protein.
  
     0.634
EFL39983.1
Conserved hypothetical protein.
  
     0.625
EFL42307.1
Transcriptional regulator.
  
     0.601
EFL41936.1
Integral membrane protein.
  
     0.599
EFL41403.1
Membrane protein.
  
     0.575
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.