STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41196.1Ectoine/hydroxyectoine ABC transporter solute-binding protein. (304 aa)    
Predicted Functional Partners:
EFL41194.1
Ectoine/hydroxyectoine ABC transporter, permease EhuD.
 
 0.998
EFL41195.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 
 0.998
EFL41193.1
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
 0.981
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.857
EFL41197.1
Conserved hypothetical protein.
 
     0.849
EFL42062.1
ABC transporter permease.
 
 0.811
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.805
EFL39178.1
Arginine/ornithine transporter; Truncated CDS.
 
 0.805
EFL42063.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.805
EFL38732.1
Glutamate permease; Overlaps another CDS with the same product name.
 
 0.802
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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