Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL41197.1Conserved hypothetical protein. (164 aa)    
Predicted Functional Partners:
EFL41196.1
Ectoine/hydroxyectoine ABC transporter solute-binding protein.
 
     0.845
EFL41194.1
Ectoine/hydroxyectoine ABC transporter, permease EhuD.
 
     0.817
EFL41195.1
Ectoine/hydroxyectoine ABC transporter, permease EhuC.
 
     0.814
EFL41193.1
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
     0.813
EFL41201.1
Decarboxylase; Overlaps another CDS with the same product name.
 
     0.812
EFL41200.1
Decarboxylase; Truncated CDS; overlaps another CDS with the same product name.
 
     0.810
EFL41198.1
Amidase; Belongs to the amidase family.
 
     0.616
EFL41199.1
NAD-binding protein.
 
     0.585
EFL42056.1
Ectoine hydroxylase.
 
     0.459
EFL40800.1
Pyridoxamine 5-phosphate oxidase.
  
     0.429
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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