STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41209.1Secreted protein. (301 aa)    
Predicted Functional Partners:
EFL41207.1
Conserved hypothetical protein.
 
     0.932
EFL41208.1
Membrane protein.
 
     0.932
EFL41210.1
Integral membrane protein.
 
     0.798
EFL41211.1
Phosphoglycerate mutase.
       0.693
EFL41206.1
Conserved hypothetical protein.
       0.657
EFL37579.1
Conserved hypothetical protein.
  
     0.642
EFL41205.1
Conserved hypothetical protein.
       0.630
EFL40389.1
Membrane protein.
  
     0.628
EFL37226.1
Response regulator receiver protein.
  
     0.602
EFL37212.1
Response regulator receiver protein.
  
     0.587
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.