STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41210.1Integral membrane protein. (319 aa)    
Predicted Functional Partners:
EFL41209.1
Secreted protein.
 
     0.804
EFL41211.1
Phosphoglycerate mutase.
       0.765
EFL41208.1
Membrane protein.
 
     0.728
EFL41207.1
Conserved hypothetical protein.
       0.685
EFL42256.1
Ferredoxin.
  
     0.618
EFL42955.1
Conserved hypothetical protein.
  
     0.584
EFL40817.1
Integral membrane protein.
 
   
 0.568
EFL42171.1
Membrane protein.
 
     0.490
EFL41205.1
Conserved hypothetical protein.
       0.481
EFL40454.1
Integral membrane protein.
  
     0.473
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.