STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41219.1Beta-galactosidase. (479 aa)    
Predicted Functional Partners:
EFL38432.1
SMI1/KNR4 family protein.
   
   0.754
EFL37481.1
PTS system, IIBC component.
  
 
 0.751
EFL42518.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.696
EFL37890.1
6-phospho-beta-glucosidase.
    
 0.670
EFL41328.1
Glycosyl hydrolase, family 4.
    
 0.670
EFL42522.1
PTS system, glucose-specific IIABC component.
  
 
 0.666
EFL38805.1
Beta-glucosidase.
    
 0.655
EFL42884.1
beta-D-xylosidase; Truncated CDS; unextendable partial coding region.
    
 0.655
EFL37984.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
    
  0.645
EFL41187.1
Secreted endoglucanase; Belongs to the glycosyl hydrolase family 6.
    
  0.645
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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