STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41219.1Beta-galactosidase. (479 aa)    
Predicted Functional Partners:
EFL37481.1
PTS system, IIBC component.
  
 
 0.759
EFL42518.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 0.652
EFL37865.1
crp/Fnr family transcriptional regulator.
    
  0.630
EFL37890.1
6-phospho-beta-glucosidase.
    
 0.630
EFL37963.1
crp/Fnr family transcriptional regulator.
    
  0.630
EFL41328.1
Glycosyl hydrolase, family 4.
    
 0.630
EFL42917.1
Endo-1,4-beta-xylanase Z.
     
 0.625
EFL38805.1
Beta-glucosidase.
    
 0.623
EFL42884.1
beta-D-xylosidase; Truncated CDS; unextendable partial coding region.
    
 0.623
EFL41222.1
Extracellular sugar-binding protein.
 
     0.613
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.