STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41239.1acyl-CoA dehydrogenase. (386 aa)    
Predicted Functional Partners:
EFL42738.1
Electron transfer flavoprotein, alpha subunit.
 
 0.963
EFL43338.1
Fatty oxidation complex, alpha subunit.
  
 0.954
EFL42737.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.951
EFL41242.1
propionyl-CoA carboxylase, beta subunit.
 
 
 0.934
EFL37849.1
Fatty oxidation complex, alpha subunit.
  
 0.912
EFL41240.1
hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase).
  
 0.856
EFL41244.1
Long-chain specific acyl-CoA dehydrogenase.
 
  
 
0.851
EFL41241.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.849
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
  
 0.830
EFL40773.1
enoyl-CoA hydratase/isomerase.
   
 0.806
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.