Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL41243.1TetR family transcriptional regulator. (199 aa)    
Predicted Functional Partners:
EFL41242.1
propionyl-CoA carboxylase, beta subunit.
 
   
 0.844
EFL41240.1
hydroxymethylglutaryl-CoA lyase (HMG-CoA lyase) (HL) (3-hydroxy-3-methylglutarate-CoA lyase).
     
 0.806
EFL41244.1
Long-chain specific acyl-CoA dehydrogenase.
     
 0.769
EFL41241.1
acetyl/propionyl-CoA carboxylase, alpha subunit.
   
 
 0.575
EFL41231.1
Acetyltransferase.
       0.552
EFL41246.1
Conserved hypothetical protein.
       0.552
EFL41234.1
Secreted protein.
       0.550
EFL41239.1
acyl-CoA dehydrogenase.
     
 0.545
EFL41245.1
acyl-CoA thioesterase II.
       0.523
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.467
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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