Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41253.1Extracellular ribonuclease. (275 aa)    
Predicted Functional Partners:
EFL42015.1
Endonuclease/exonuclease/phosphatase.
   
 0.748
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
     
 0.719
EFL40710.1
Serine metalloprotease MprA.
     
 0.719
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
     
 0.719
EFL37299.1
Conserved hypothetical protein.
   
   0.624
EFL42173.1
Conserved hypothetical protein.
   
   0.624
dinB
DNA polymerase IV (Pol IV); Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
   
   0.624
EFL39152.1
Cell division protein FtsW; Belongs to the SEDS family.
    
   0.617
EFL40353.1
Cell division protein FtsW; Belongs to the SEDS family.
    
   0.617
EFL41374.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
    
   0.617
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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