STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41257.1S37 family peptidase. (477 aa)    
Predicted Functional Partners:
EFL41256.1
Secreted protein.
       0.772
EFL41711.1
Alpha-amylase.
    
  0.712
EFL42077.1
Cobaltochelatase, CobN subunit.
     
 0.608
EFL41254.1
ABC transporter, permease/ATP-binding protein.
       0.590
EFL37315.1
3-phytase.
       0.572
EFL41255.1
Hypothetical protein.
       0.512
EFL41253.1
Extracellular ribonuclease.
 
   
 0.504
EFL40282.1
Extracellular small neutral protease; Belongs to the peptidase M7 family.
  
     0.500
EFL42075.1
cob(I)yrinic acid a,c-diamide adenosyltransferase.
     
 0.498
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
   
    0.479
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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