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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsDRibose ABC transporter RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (129 aa)    
Predicted Functional Partners:
EFL41270.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.963
EFL41269.1
Ribokinase; Unextendable partial coding region.
 
  
 0.950
EFL43198.1
Sugar ABC transporter, solute-binding protein.
 
  
 0.865
EFL43407.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.864
EFL43408.1
Sugar ABC-type transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.854
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.827
rbsA
Ribose import ATP-binding protein RbsA 2; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 0.826
EFL43195.1
ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.824
EFL43196.1
Ribose transport system permease RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.801
EFL43002.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.777
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.