STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbsDRibose ABC transporter RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (129 aa)    
Predicted Functional Partners:
EFL41270.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.963
EFL41269.1
Ribokinase; Unextendable partial coding region.
 
  
 0.904
EFL43198.1
Sugar ABC transporter, solute-binding protein.
 
  
 0.864
EFL43407.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.864
EFL43408.1
Sugar ABC-type transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.860
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.835
rbsA
Ribose import ATP-binding protein RbsA 2; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  
 0.834
EFL43195.1
ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.832
EFL43196.1
Ribose transport system permease RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.810
EFL43002.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.787
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.