STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41270.1Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family. (652 aa)    
Predicted Functional Partners:
rbsA
Ribose import ATP-binding protein RbsA 2; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.990
rbsD
Ribose ABC transporter RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.963
EFL43001.1
Ribose ABC transporter, ATP-binding protein.
 
 0.958
rbsA-2
Ribose import ATP-binding protein RbsA 1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.957
EFL43406.1
Ribose import ATP-binding protein RbsA 2.
 
 0.956
EFL37968.1
Ribose import ATP-binding protein RbsA 1.
 
 0.955
EFL41518.1
Sugar ABC transporter, ATP-binding protein.
 
 0.950
EFL37966.1
Secreted solute binding protein.
 
0.949
EFL41269.1
Ribokinase; Unextendable partial coding region.
 
    0.925
EFL43198.1
Sugar ABC transporter, solute-binding protein.
 
0.924
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.