STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41273.1Conserved hypothetical protein. (136 aa)    
Predicted Functional Partners:
EFL38274.1
Regulatory protein.
 
   0.805
EFL37501.1
Regulatory protein.
  
   0.788
EFL39443.1
Serine phosphatase.
 
 
 0.773
EFL38438.1
Regulatory protein.
  
   0.738
EFL42768.1
Conserved hypothetical protein.
  
     0.729
EFL37580.1
Conserved hypothetical protein.
  
     0.728
EFL40140.1
Regulatory protein.
  
     0.727
EFL40730.1
Conserved hypothetical protein.
  
     0.727
EFL41940.1
Conserved hypothetical protein.
 
 
 0.712
EFL37444.1
Conserved hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
  
   0.707
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.