STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41279.1Recombinase. (320 aa)    
Predicted Functional Partners:
EFL39025.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.671
EFL37927.1
Hypothetical membrane protein.
  
     0.669
EFL41283.1
Tn3 family transposase.
  
     0.650
EFL43330.1
Conserved hypothetical protein.
  
     0.622
EFL42672.1
Conserved hypothetical protein.
  
     0.574
EFL42156.1
Prephenate dehydrogenase.
  
    0.562
EFL39221.1
Conserved hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
    0.551
EFL41047.1
Conserved hypothetical protein.
   
    0.551
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
   
    0.551
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.551
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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