STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL41285.1Heavy metal-associated domain-containing protein. (100 aa)    
Predicted Functional Partners:
EFL42759.1
Copper-translocating P-type ATPase.
 
 
 0.930
EFL41284.1
Copper-exporting ATPase.
  
 
 0.911
EFL38052.1
Cadmium-translocating P-type ATPase.
  
 
 0.904
EFL37922.1
Serine/arginine repetitive matrix protein 2.
  
 
 0.891
EFL39986.1
BlaI/MecI/CopY family transcriptional regulator.
 
  
 0.853
EFL41286.1
Alcohol dehydrogenase, zinc-containing; Truncated CDS.
       0.782
EFL40363.1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
   0.685
EFL42426.1
Peptidylprolyl isomerase B.
  
   0.685
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.655
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
  
 0.649
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.