STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL41300.1Tyrosinase. (285 aa)    
Predicted Functional Partners:
EFL42368.1
Conserved hypothetical protein.
     
 0.879
EFL39733.1
Aspartate transaminase.
     
  0.850
pat
Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
     
  0.850
hisC
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
     
  0.850
EFL42066.1
CobC protein.
     
  0.850
EFL40837.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
  0.822
EFL41233.1
L-2,4-diaminobutyrate decarboxylase (DABA decarboxylase)(DABA-DC).
     
  0.768
EFL41515.1
Aminotransferase; Unextendable partial coding region.
     
  0.670
EFL38197.1
Aspartate aminotransferase.
     
  0.609
EFL39426.1
Aminotransferase, classes I and II.
     
  0.609
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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